Biological Statistics and Computational Genomics

Be solid, be open-minded

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R-packages and softwares

BIC-seq: An R package for detecting copy number variations with high throughput sequencing data

Test Data for BICseq


BIC-seq2: A perl pipeline for detecting copy number variations by normalizing the high throughput sequencing data.

Pysim-sv
: A Python package for simulating structural variation data with GC-biases.

Difdtl: An R package for differential network analysis based on the penalized D-trace loss.

BEQ: An R package for Bayesian variable selection in Quantile Regression based on the empirical likelihood